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Bioinformatics Services

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CD Genomics provides statistical and bioinformatic data analysis services that help our customers to explain large amounts of data that generated by sequencing, genotyping, and microarray experiments.

Overview

Next-generation sequencing has fundamentally revolutionized biological and medical sciences. A sequencing/microarray data analysis project requires careful planning, seasoned methodology, and concise reporting. CD genomics is an expert company offering comprehensive bioinformatics solutions in all aspects of sequencing and microarray. We provide data analysis service for data generated by a wide range of sequencing/microarray platforms. We use the cutting-edge bioinformatics algorithms and pipeline, and provide you with high-quality and ready-for-publication figures.

Our bioinformatic staff consist of PhD-level scientists trained in computer languages, statistics, bioinformatics, genetics, and genomics. The software infrastructure for analysis is a combination of custom-built and open-source software. Our bioinformatics services take your raw next/third generation data and provide you with comprehensive figures customized to your research purposes as well as personalized data interpretation support. CD Genomics’ full range of bioinformatics services can be an ideal solution for you.

Bioinformatics Workflow

High-throughput sequencing technology can generate numerous data with heterogeneous quality, and there is no optimal bioinformatics pipeline for all cases. We are specialized in customizing the bioinformatics pipeline for your specific projects. We support companies and research groups by turning ideas into concrete project plans and implementing them, thereby making full use of your data.

  • NGS data analysis workflow

bioinformatics services
(Roy et al. 2016)

General bioinformatics workflow for NGS data includes base calling (platform specific), demultiplexing (optional), sequence alignment, and variants calling.
  • Microarray data analysis workflow

bioinformaticsservices
(Afshari et al. 2010)

General bioinformatics workflow for microarray data includes data correction for background, normalization, gene expression patterns clustering, class prediction, and biological mechanism prediction.

Service Range

CD Genomics’ bioinformatics services cover a wide range of genomic applications, including genomics, transcriptomics, epigenomics, and microarray.

Genomic Data Analysis

Transcriptomic Data Analysis

Epigenomics Data Analysis

Microarray Data Analysis

We provide custom, accurate, and specific solutions to the following aspects of researchers’ interests:

  • Functional gene annotation
  • Gene/ORF prediction
  • Gene ontology and pathway enrichment analysis
  • Sequence/Genome alignment
  • Motif prediction
  • Variants calling
  • Comparative genomics
  • Phylogenetic analysis
  • Bioinformatics databases and data mining
  • Bioinformatics consulting

Our advantages

  • Custom bioinformatics
  • Illumina, Ion Torrent, PacBio SMRT, and Nanopore compatible
  • Publication-ready data and figures
  • Accurate sequencing and microarray services available
  • Professional and experienced expert team
  • Fast turnaround time

Talk to a scientist

Want more information about our bioinformatics services or interested in bioinformatics analysis of your raw high-throughput sequencing or microarray data? Please feel free to submit a service inquiry. We are here to help!

References:

  1. Roy, S.; et al. Next-Generation Sequencing Informatics: Challenges and Strategies for Implementation in a Clinical Environment. Archives of Pathology & Laboratory Medicine, 2016, 140(9), 958–975.
  2. Afshari, C. A., Hamadeh, H. K., & Bushel, P. R. The Evolution of Bioinformatics in Toxicology: Advancing Toxicogenomics. Toxicological Sciences, 2010, 120(Supplement 1), S225–S237. doi:10.1093/toxsci/kfq373
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CONTACT CD GENOMICS

45-1 Ramsey Road, Shirley, NY 11967, USA
Tel: 1-631-275-3058
Fax: 1-631-614-7828
Email: info@cd-genomics.com