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CDCap™ Hema-Tumor Expanded Gene Panel Kit

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PNO010-1 16rxn
PNO010-2 96rxn
Overview

Product Description

CDCap™ Hema-Tumor Expanded Gene Panel employs a hybridization capture-based dual-omics architecture to comprehensively interrogate 481 clinically relevant genes in hematologic malignancies. This integrated platform enables simultaneous detection of diverse genomic aberrations, including single-nucleotide variants (SNVs), insertions/deletions (Indels), copy number variations (CNVs), and fusion events.

Hema-Tumor DNA Tube
Covers 1.7 Mb of genomic regions, including the full coding regions of 436 genes, partial intronic regions of 12 genes, and the IGH Switch regions for robust mutation analysis.

Hema-Tumor RNA Tube
Targets 146 genes with optimized primer design to accurately detect fusion genes, complementing the DNA workflow for resolving structural variants.

By combining multi-omics approaches with a highly targeted design, the CDCap™ Hema-Tumor Expanded Gene Panel delivers a cost-effective solution for precision analysis, research decision support, and longitudinal tracking of hematologic malignancies.

Features

Key Features & Advantages

Comprehensive Mutation Coverage
· Enables detection of base substitutions, indels, amplifications, and gene fusions across 481 hematologic malignancy-associated genes.
Synergistic Dual Workflow
· The RNA workflow compensates for DNA workflow limitations by identifying fusion partners and validating functional impacts, ensuring high-confidence variant detection.
Flexible Customization
· Supports subdivision into sub-panels or addition of custom targets to address diverse research and clinical needs.

Specifications

Product Specifications

Enrichment Method: Probe Hybridization Capture
Species: Human
Variant Types: SNV、Indel、Fusion、CNV
Target Size: DNA Panel:1.7M
Cancer Type: eukemia/lymphoma/multiple myeloma/myelodysplastic syndromes
Number of Genes: 481,DNA:436,RNA:146
Sample Type: blood,Bone Marrow etc.
Input DNA/RNA: >30ng
Method: NGS
Sequencing Platform: Illumina
Storage: Store at -20 °C.
Data

Data

1、DNA Capture Performance

Figure 1. CDCap™ Hema-Tumor Expanded Gene Panel_DNA applied to various types of gDNA samples. A. Mappability & On-target rate; B. Target covered; C. Average sequencing depth after deduplication; D. GC bias.
Note: LDT-831: hematologic malignancy gDNA quality control (LDT Bioscience; LDT-831A: AF = 5%; LDT-831D: AF = 0%). Male: human genomic DNA standard (Promega, G1471).

2、Stable Detection of Multiple Mutation Types

Detection of various mutation types in different standard samples using CDCap™ Hema-Tumor Expanded Gene Panel_DNA.

3、RNA Capture Performance

Figure 2. Composition of capture sequencing data using CDCap™ Hema-Tumor Expanded Gene Panel_RNA.
For the K562 cell line RNA (50 ng). Sequencing was performed on NovaSeq 6000 (PE150) (A) and DNBSEQ-T7 (PE150) (B), with analysis performed using Salmon.

4、Fusion Detection

Detection of fusion genes in K562 cell line RNA using CDCap™ Hema-Tumor Expanded Gene Panel_RNA.
Note: Data are reported per M read pairs (approximately 0.3 Gb); analysis was performed using Arriba.

Gene List

Gene List

CDCap™ Hema-Tumor Expanded Gene Panel_DNA_436 genes_Full CDS

ABL1 ABL2 ACTB AKT1 AKT2 AKT3 ALK AMER1 ANKRD35 APBB1 APC AR ARAF ARHGAP26 ARID2A
ARID2B ARID3 ARID5B ASXL1 ASXL2 ASXL3 ATG5 ATM ATR ATRX ATXN2 AURKA AURKB AURM1 AXL
BLM BRAF BRAF1 BRAF6 BLC10 BLC11 BLC11B BLC16 BLC6 BLC7A1 BCOR BCORL1 BKLC BLM BLNK
BRPF1 BRCA1 BRCA2 BRD1 BRD2 BRD4 BRIP1 BUB1B BUBR1 CALR CAROL1 CCNB1 CCND1 CCND2
CCND3 CCNE1 CCNE2 CCNT1 CCT8B CD2 CDT1 CDT4 CDK8 CDK8S CDK10 CDK19 CDK19B CDK8 CORC4
COG73 COPH1 COPH2 COPH4 COPS8 COPB1 COPB2 COPS10 COPS2 CONDCA COND8 COND28 COND22 CEBPA CEP57 CHD2
CHD8 CHEK1 CHEK2 CKTA CKS1B CNRBP CRLF2 CSP1R CSP3R CTCF CTLA4 CTNNB1 CUX1 CCNC CYLD
DAXX DDR2 DDX1X DDX41 DHX35 DNAH1 DMT1A DOT1L DTX1 DUSP2 DUSP22 EBF1 ECT2L ELO EGFR
EP300 EPCAM EPH4B EPH4A EPHAS1 EPHX1 EMR2 EMR3 EMR4 EMR5 EMX1 EMX2 EMX3 ESAM ETV6 ETSI
ETV5 ETV6 ETV5 FAMAC FANCA FANCC FANCD2L FANCE FANCF FANCG FANCI FANCL FANCM
FAS FAT11 FAT14 FBXO11 FBXO7 FGFR1 FGFR2 FGFR3 FGFR4 FH FLCN FLT1 FLT3 FLT4 FOXO3
FOXD3 FOXP1 FN GA949 GATA1 GATA2 GATA3 GNAI1 GNA13 GNAQ GNAS GNB1 GNB3A HACE1 HBA1
HRB2 HHRP HNRNPC HNRNPA2B1 HIST1H1C HIST1H1D HIST1H1E HNF1A HRAS ID3 IDH1 IDH2
INHBA IGF1R IGH IKK IKL IGL5 IRF6 IKZF1 IKZF2 IKZF3 IL3 IL7R INPP8B INPP5D IRF1
IRF4 IRF8 ITK ITPRB JAK1 JAK2 JAK3 JARID2 JUN KAT6A KDM2B KDM5A KDM6C KDM6A KOR
KIT KIT2 KITL5 KITL6 KMT2A KMT2B KMT2C KMT2D KRAS LEF1 LMO2 LPP1B LTB LXN LYST
MAP1 MAP9 MAL11 MAP2K1 MAP2K2 MAP2K4 MAP3K1 MAP3K14 MAP3K2 MCL1 MDM1 MDM4 MEL18 MZF2B MZF2D
MEN1 MET MPHAS1 MGA MTF2 MLH1 MPL MSH2 MSH3 MSH6 MTOR MUTYH MYB MYC MYCL
MYCN MYOD1 NHSL1 NCKAP1L NCSTN NF1 NF2 NFETL3 NPHS1 NPHS2 NPHS4 NPHVE NOV-1 NR4A NOTCH1
NOTCH2 NPHS1 NRAS NSG1 NTSC2 NTRK1 NTRK3 NUP98 PBX8 PAG1 PAX5 PALB2 PAX5 PBRM1 PC
PCCD1 PCCD1LG2 PDGFRA PDGFRB PKD1 PHF6 PKDCA PKDCC PKLR1 PKLR2 PNI1 PLCG1 PLCG2 PML PHZ2
POLE POT1 POLGAM1 PPM1D PPARD2A PRDM1 PRF1 PRKCB PRKPR PTPN1 PTPN11 PTPN6 PTPN6
PTPRD PTPRK PTPRO RAD51A RAD21 RAD50 RAD51 RAF1 RARA RASEF2A RB1 RECQL4 REL RELN RET
RHOA RICTOR RNF43 RGS1 RPL10 RPL5A RPTOR RUNX1 SAMD9 SAMD9L SBDS SDHA SDHB SDHC SDHD
SETBP1 SETD2 SF3B1 SOX1 SHC2B SH2D1A SLIC3H1 SLCTA1 SMAD2 SMAD4 SMARC2 SMARC4 SMARCB1 SNCA SNC3
SMG2 SOCS1 SOD1L1 SOD2 SPEN SPOP SRC SRY12 SRF2 STAT2 STAT3 STAT4 STAT5A STAT5B STAT6
STK11 STAT1 STKBP2 SULT1 SUZ12 SYK TRIM24 TGCT TCL3 TENC1 TENT1 TENT2 TENT3 TGFR2
TNKS1 TNKS1F2 TNKSNF2 TNKS1RBF2 TCPA TCP4 TP53 TP53BP1 TP73 TMX4 TMX5 TSC1 TSC2
TSHR TRX2 ULK1F UNC13D VAV1 VHL WN5C1 WTI XMP XPC XPO1 ZAP70 ZBTB3A ZEB2 ZMYM3
ZRSR2
CDCap™ Hema-Tumor Expanded Gene Panel_DNA_12 genes_Selected Intron
ALK BLC6 BCR BRPF1 ETV6 JAK2 KMT2A MYC PDGFRA PDGFRB RARA RET
CDCap™ Hema-Tumor Expanded Gene Panel_RNA_146 genes
ABL1 ABL2 ALK ARHGAP26 ARID1A ASXL1 ATG5 BCL10 BCL11A BCL11B BCL2 BCL3 BCL6 BCL7A BCL9
BCOR BCR BIRC3 BRAF BTG1 CBFA2T3 CBFB CBL CCND1 CCND2 CCND3 CD274 CDK6 CEBPE CITTA
CREBBP CRLF2 CTNNB1 DEK DUSP22 DUX4 EGFR EP300 EPOR ERBB2 ERG ETS1 ETV1 ETV4 ETV6
EWSR1 FGFR1 FGFR2 FGFR3 FOXO1 FOXO3 FOXP1 GLIS2 HLF IGH IGK IGL IKZF1 IL3 IRF4
ITK JAK1 JAK2 JAK3 KAT6A KIF5B KMT2A LMO1 LMO2 LYN MAF MAFB MALT1 MECOM MEF2D
MLLT1 MLLT10 MLLT3 MN MTCF1 MYB MYC MYH11 NCOA2 NCOR1 NF1 NF2 NFKB2 NOTCH1 NPM1
NSD1 NTRK1 NTRK3 NUP214 NUP98 NUTM1 P2RY8 PAX5 PBX1 PDCD1LG2 PDGFRA PDGFRB PICALM PIM1 PML
POU2AF1 PRDM1 PTCH1 RAF1 RARA RARB RARG RBM15 RET ROS1 RUNX1 RUNX1T1 STAT6 STIL SYK
TAF15 TAL1 TBL1XR1 TCF3 TCL1A TCL1B TET1 TLX1 TLX3 TNFRSF11A TOP1 TP63 TPM3 TPM4 TRA
TRB TRD TRG TYK2 VAV1 WHSC1 ZBTB16 ZEB2 ZNF292 ZNF362 ZNF384

* For research purposes only, not intended for clinical diagnosis, treatment, or individual health assessments.
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